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Showing results for: AUTHOR - Oshlack, A

Found: 35 results

MLL-TFE3: a novel and aggressive KMT2A fusion identified in infant leukemia Blood Advances - 2020-10-13 Kosasih, HJ; Davidson, NM; Bjelosevic, S; Morrish, E; Brennan, MS; Oshlack, A; Johnstone, RW; Brumatti, G; Khaw, SL; Ekert, PG
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The application of RNA sequencing for the diagnosis and genomic classification of pediatric acute lymphoblastic leukemia Blood Advances - 2020-03-10 Brown, LM; Lonsdale, A; Zhu, A; Davidson, NM; Schmidt, B; Hawkins, A; Wallach, E; Martin, M; Mechinaud, FM; Khaw, SL; Bartolo, RC; Ludlow, LEA; Challis, J; Brooks, I; Petrovic, V; Venn, NC; Sutton, R; Majewski, IJ; Oshlack, A; Ekert, PG
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SuperFreq: Integrated mutation detection and clonal tracking in cancer PLoS Computational Biology - 2020-02-13 Flensburg, C; Sargeant, T; Oshlack, A; Majewski, IJ
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Targeted therapy and disease monitoring in CNTRL-FGFR1-driven leukaemia Pediatric Blood & Cancer - 2019-06-28 Brown, LM; Bartolo, RC; Davidson, NM; Schmidt, B; Brooks, I; Challis, J; Petrovic, V; Khuong-Quang, DA; MeChinaud, F; Khaw, SL; Majewski, IJ; Oshlack, A; Ekert, PG
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Ximmer: A system for improving accuracy and consistency of CNV calling from exome data GigaScience - 2018-09-06 Sadedin, SP; Ellis, JA; Masters, SL; Oshlack, A
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Clinker: visualising fusion genes detected in RNA-seq data Gigascience - 2018-07-04 Schmidt, BM; Davidson, NM; Hawkins, ADK; Bartolo, R; Majewski, IJ; Ekert, PG; Oshlack, A
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Functionally distinct roles foar different miR-155 expression levels through contrasting effects on gene expression, in acute myeloid leukemia Leukemia - 2017-04 Narayan, N; Morenos, L; Phipson, B; Willis, SN; Brumatti, G; Eggers, S; Lalaoui, N; Brown, LM; Kosasih, HJ; Bartolo, RC; Zhou, L; Catchpoole, D; Saffery, R; Oshlack, A; Goodall, GJ; Ekert, PG
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Removing unwanted variation in a differential methylation analysis of Illumina HumanMethylation450 array data Nucleic Acids Res - 2015-05-18 Maksimovic, J; Gagnon-Bartsch, JA; Speed, TP; Oshlack, A
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Jarid2 regulates hematopoietic stem cell function by acting with polycomb repressive complex 2 Blood - 2015-03-19 Kinkel, SA; Galeev, R; Flensburg, C; Keniry, A; Breslin, K; Gilan, O; Lee, S; Liu, J; Chen, K; Gearing, LJ; Moore, DL; Alexander, WS; Dawson, M; Majewski, IJ; Oshlack, A; Larsson, J; Blewitt, ME
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Cpipe: a shared variant detection pipeline designed for diagnostic settings Genome Medicine - 2015 Sadedin, SP; Dashnow, H; James, PA; Bahlo, M; Bauer, DC; Lonie, A; Lunke, S; Macciocca, I; Ross, JP; Siemering, KR; Stark, Z; White, SM; Melbourne Genomics Health, Alliance; Taylor, G; GAFF, C; Oshlack, A; Thorne, NP
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JAFFA: High sensitivity transcriptome-focused fusion gene detection Genome Med - 2015 Davidson, NM; Majewski, IJ; Oshlack, A
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The polycomb repressive complex 2 governs life and death of peripheral T cells Blood - 2014-06-20 Zhang, Y; Kinkel, S; Maksimovic, J; Bandala-Sanchez, E; Tanzer, MC; Naselli, G; Zhang, JG; Zhan, Y; Lew, AM; Silke, J; Oshlack, A; Blewitt, ME; Harrison, LC
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Susceptibility to acute rheumatic fever based on differential expression of genes involved in cytotoxicity, chemotaxis, and apoptosis Infection and Immunity - 2014-02 Bryant, PA; Smyth, GK; Gooding, T; Oshlack, A; Harrington, Z; Currie, B; Carapetis, JR; Robins-Browne, R; Curtis, N
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A comparison of control samples for ChIP-seq of histone modifications Front Genet - 2014 Flensburg, C; Kinkel, SA; Keniry, A; Blewitt, ME; Oshlack, A
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Genome-wide DNA methylation analysis identifies hypomethylated genes regulated by FOXP3 in human regulatory T cells. Blood - 2013-10-17 Zhang, Y; Maksimovic, J; Naselli, G; Qian, J; Chopin, M; Blewitt, ME; Oshlack, A; Harrison, LC
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Identification of recurrent FGFR3 fusion genes in lung cancer through kinome-centred RNA sequencing JOURNAL OF PATHOLOGY - 2013-07 Majewski, IJ; Mittempergher, L; Davidson, NM; Bosma, A; Willems, SM; Horlings, HM; de Rink, I; Greger, L; Hooijer, GKJ; Peters, D; Nederlof, PM; Hofland, I; de Jong, J; Wesseling, J; Kluin, RJC; Brugman, W; Kerkhoven, R; Nieboer, F; Roepman, P; Broeks, A; Muley, TR; Jassem, J; Niklinski, J; van Zandwijk, N; Brazma, A; Oshlack, A; van den Heuvel, M; Bernards, R
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ChIP-seq analysis reveals distinct H3K27me3 profiles that correlate with transcriptional activity NUCLEIC ACIDS RESEARCH - 2011-09 Young, MD; Willson, TA; Wakefield, MJ; Trounson, E; Hilton, DJ; Blewitt, ME; Oshlack, A; Majewski, IJ
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Expression discordance of monozygotic twins at birth Effect of intrauterine environment and a possible mechanism for fetal programming EPIGENETICS - 2011-05 Gordon, L; Joo, JHE; Andronikos, R; Ollikainen, M; Wallace, EM; Umstad, MP; Permezel, M; Oshlack, A; Morley, R; Carlin, JB; Saffery, R; Smyth, GK; Craig, JM
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Optimizing the noise versus bias trade-off for Illumina whole genome expression BeadChips NUCLEIC ACIDS RESEARCH - 2010-12 Shi, W; Oshlack, A; Smyth, GK
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From RNA-seq reads to differential expression results GENOME BIOLOGY - 2010 Oshlack, A; Robinson, MD; Young, MD
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Gene ontology analysis for RNA-seq: accounting for selection bias GENOME BIOLOGY - 2010 Young, MD; Wakefield, MJ; Smyth, GK; Oshlack, A
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A scaling normalization method for differential expression analysis of RNA-seq data GENOME BIOLOGY - 2010 Robinson, MD; Oshlack, A
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Segmental Duplications Contribute to Gene Expression Differences Between Humans and Chimpanzees GENETICS - 2009-06 Blekhman, R; Oshlack, A; Gilad, Y
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Transcript length bias in RNA-seq data confounds systems biology BIOLOGY DIRECT - 2009-04-16 Oshlack, A; Wakefield, MJ
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Gene Regulation in Primates Evolves under Tissue-Specific Selection Pressures PLOS GENETICS - 2008-11 Blekhman, R; Oshlack, A; Chabot, AE; Smyth, GK; Gilad, Y
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